CBR Research Grants

Project Summaries—1999

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200820072006200520042003200220012000—1999—1998199719961995

Oxalate, Glycolate and Selenium in Neonatal Nutrition. High Resolution Analytical Chemical Methods for the Clinical Study of Premature Infants
Peter Uden, Ph.D., Chemistry, UMass
Gary Rockwell, M.D., Newborn Medicine and Pediatrics, Baystate
Nigel Metcalfe, Graduate Student, Chemistry, UMass

The long-term goal of this clinical research is to improve the prognosis of premature infants by increasing our understanding of kidney stone formation, a problem that occurs in up to 64 percent of premature infants and is associated with persistent defects in kidney function that can be life-threatening. The disorder is characterized by high levels of two biochemicals, oxalate and glycolate, in the infant's urine. The researchers will study the levels of these biochemicals in infants' urine to determine how well the infants can metabolize these biochemicals. The information will be valuable in offering new treatments for pre-term infants.

Effective Date - September 1, 1999

Early Signaling Events in the Apoptotic Response of Detached Mammary Epithelial Cells
Joseph Jerry, Ph.D., Veterinary & Animal Sciences, UMass
Chistopher Otis, M.D., Surgical Pathology, Baystate
Lisa Minter, Graduate Student, Veterinary & Animal Sciences

Loss of anchorage-dependant growth is a hallmark of malignant transformation, as cells lose their ability to monitor and respond to signals from their extracellular surroundings. Under conditions causing detachment, normal mammary epithelial cells will initiate a cell death program that precludes growth of these cells in an inappropriate environment. The aim of this study is to show that, under adherent conditions, survival signals from the extracellular matrix (ECM), as transduced by integrin receptors through phosphorylated pp125FAK, suppress a p53-medicated apoptotic pathway. It is expected that under non-adherent conditions, loss of integrin-transduced survival signals from the EMC would inactivate pp125FAK, via its dephosphorylation, allowing depression of the p53-mediated cell death response.

Effective Date - September 1, 1999

Extramural Funding:
DPH Mass (12/99 – 4/01) - $58,193
U S Army Medical Research (9/00- 9/02) - $76,750
PHS/NIH (9/00- 9/02) - $232,500
PHS/NIH (6/01- 5/03) - $225,777

Exercise-induced Skeletal Muscle Damage and Repair in Mice: The Heat Shock Response
S.P. Scordilis, Ph.D., UMass MCB Program, Biology, Smith College
Luis Moral, M.D., Director of Neuropathology, Baystate
Clayton Wagner, M.D., New England Orthopedic Surgeons, & Baystate
Heather Thompson, Graduate Student, Molecular & Cellular Biology, UMass

This study's goal is to enhance the understanding of the mouse skeletal muscle stress response to exercise-induced muscle damage through the use of two different exercise modalities. It also describes the post-exercise translational and transcriptional regulation of the heat shock response to exercise.

Effective Date - September1, 1999

Effects of Light on the Dorsal Raphe Serotonin System
Katherine Fite, Ph.D., Psychology, UMass
Warren Foote, M.D., Director of Medical Research, Baystate
Skirmantas Janusonis, Graduate Student, Neuroscience & Behavior, UMass

This study considers the therapeutic effects of light on a region of the brainstem that produces a neurotransmitter, serotonin, which has been implicated in a variety of clinical disorders that involve depression and mood changes. Results of this study could bring new understanding to the cause of seasons effective disorder, (SAD), in which people become depressed during times of year when there is only limited daylight. Specifically, researchers are interested in learning about the function of a newly discovered pathway from the retina to the brainstem and how this optic pathway can influence the activity of serotonin-producing neurons.

Effective Date - September 1, 1999

Extramural Funding:
NSF (12/1000) - $400,000


The Role of a Specific Gene in Childhood Tumors
Lawrence Schwartz, Ph.D., Biology, UMass
Stephen Naber, M.D., Pathology, Baystate
Christos Valavanis, Post-doctoral, Biology, UMass

This study focuses on the role of the 44a gene. Preliminary data suggests that this gene may play a role in the potential of certain childhood tumors to spread. The goals of this project are to understand how the 44a gene product is distributed in normal tissues, malignant tissues, and where 44a's location lies in the human genome.

Effective Date - September 1, 1999

Extramural Funding:
NIH (9/99) - $1,169,616

Autoantibody Diversity and Pathogenicity in Autoimmune Disorders
Richard Goldsby, Ph.D., Biology, Amherst College
Chester Andrzejewski, Ph.D., M.D., Bone Marrow & Transplant Unit, Baystate

The goals of this study are to investigate the pathogenic potentials of autoantibodies directed against red blood cells (RBC) and the cells producing them. The results of this investigation should bring further insight into the etiopathogenesis of autoimmune diseases and facilitate their diagnosis and clinical management.

Effective Date - January 1, 1999

Development of Computer Vision Techniques in Stroke Treatment
Edward Riseman, Ph.D., Computer Science, UMass
Gary Whitten, Ph.D., Computer Science, UMass
Donald Geman, Ph.D., Mathematics and Statistics
Joseph Horowitz, Ph.D., Mathematics and Statistics
Richard Hicks, M.D., Radiology, Baystate Medical Center
Benjamin Stein, Graduate Student, Mathematics and Statistics, UMass
Dimitri Lisin, Graduate Student, Computer Science, UMass

The goal of this study is to use computer imaging technology to help determine the effectiveness of treatments for high blood pressure. More specifically, the study looks at how computers can "look" at images, define abnormal brain areas, and relate it to a patient's condition.

Effective January 1, 1999

Publications:
Horowitz, J., and Stein, B., (2001). A Statistical Approach to the Segmentation of MR Imagery and Volume Estimation of Stroke Lesions. Proc. Interface 2001 Conf., Costa Mesa CA, 14-16 June 2001, on CD-ROM.

Riseman, E., Stein, B., Lisin, D., Horowitz, J., and Whitten, G., (2001). Statistical and deformable model approaches to the segmentation of MR imagery and volume estimation of stroke. Proc. MICCAI2001: Fourth Internat'l. Conf. Med. Image Computing and Computer-Assisted Intervention. Utrech, The Netherlands, 14-17 Oct. 2001, 829-836.

Presentations:
Horowitz, Joseph. Statistical approaches to interpretation of MR images of the brain: segmentation and volume estimation. Plenary speaker at New England Statistics Symposium 15, April 28, 2001.

Horowitz, Joseph. Mathematics and Statistics in the Interpretation of MRI in Treatment of Strokes. Long Island University Biology Seminar, Oct. 23, 2000.

Stein, Ben. Statistical approaches to interpretation of MR images of the brain: segmentation and volume estimation. Interface Conference, June, 2001.

Whitten, Gary. Methods for segmenting magnetic resonance imagery (MRI) of ischemic stroke patents in lesion and background, with the goal of estimating lesion volumes. Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2001, Utrecht, The Netherlands, October, 2001.

Hematopoietic Stem Cell Generation Through Nuclear Reprogramming
Samuel Black, Ph.D., Veterinary and Animal Sciences, UMass
Rafael Fissore, D.V.M., Ph.D., Veterinary & Animal Sciences, UMass
James Robl, Ph.D., Veterinary & Animal Sciences, UMass
Chester Andrzejewski, Ph.D., M.D., Bone Marrow & Transplant Unit, Baystate

The goal of this project is to generate hematopoietic stem cells by reprogramming of adult cells from non-lymphoid tissues. Potential clinical benefits include production of autologous hematopoietic stem cells for therapeutic transplantation, correction of genetic defects in stem cells and development of stem cells with novel properties.

Effective Date - January 17, 1999

The Effects of Hyperbaric Oxygen on Cell Death in Lymphocytes and Neutrophils
Barbara Osborne, Ph.D., Veterinary and Animal Sciences, UMass
Eric Granowitz, M.D., Infectious Disease, Baystate
Bishy Ganguly, Graduate Student, Molecular & Cellular Biology, UMass

This project explores how hyperbaric oxygen helps persistent wounds to heal. Scientists know that persistent wounds can heal when the patient is placed in a hyperbaric chamber and exposed to oxygen, but it is unclear why this treatment works. One problem with persistent, or chronic wounds, is inflammation caused by a build-up of white blood cells, which fight infection. These investigators theorize that hyperbaric oxygen may trigger the death of some white blood cells, removing the source of inflammation.

Effective Date - January 17, 1999

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